Hive2 officially online and open for business!
Ready for the next level in computation? Hive2 is finally here! It was a long and difficult process with many obstacles and delays, in which
Insect societies are a unique model system for investigating the genetic and evolutionary mechanisms at the basis of animal sociality. Relative to vertebrates, insect social behavior is more mechanistic so it is easier to find its genetic basis. We study social evolution in ants using genomic tools: next generation sequencing technologies and computational analysis of molecular evolution. A decade ago, we knew close to nothing about the genes of ants and then suddenly full genomes were being published. Since, high quality genomic sequences were obtained from hundreds of species across the ant phylogeny. We can now compare different species and look for the genes responsible for the evolution of sociality in ants. Furthermore, dramatic advances in sequencing technologies allow genomic sequencing of hundreds of individuals from specific ant populations for focused studies on the recent evolution of social traits in systems such as “social chromosomes” in Solenopsis fire ants, Formica wood ants, and our local Cataglyphis desert ants. We use these genomic metholologies to investigate the evolutionary basis of fundamental phenomena in sociobiology, such as social organization and pheromone signaling responsible for nestmate recognition in Cataglyphis niger.
Over the years, our lab implemented multiple variaitons on protocols for population genomic sequencing (especially of RAD-seq) and various compulational analyses of such data. This led us to conduct several comparative methodologcial studies to investigate how alternative variations perform and optimize the use of such approaches. We published several methodological papers and even developped a webtool for designing RAD-seq studies – read about ddgRADer under “Infrastructure->Software”.
Ready for the next level in computation? Hive2 is finally here! It was a long and difficult process with many obstacles and delays, in which
We got some amazing denovo genome assemblies of Pogonomyrmex barbatus! They were done as part of our collaboration with Deborah Gordon’s lab. These super-high-quality, near-chromosome-level assemblies
We had a super busy trip to America! Aparna and Eyal represented the lab in the Cold Spring Harbor Lab meeting on Biology and Genomics
We concluded our latest installment of the Haifa winter workshop in genomics and bioinformatics – the 9th actually! (see more info about the workshops under
Max has some preliminary results from training a machine learning model (deep network) to identify and track ants in videos with multiple ants. You can
After considerable delays…. Hive2, the new computer cluster for our Faculty, finally arrived on campus today. It was assembled by Matrix at their facility, now
eprivman@univ.haifa.ac.il | +972-(0)54-5224888 | Institute of Evolution | Department of Evolutionary and Environmental Biology | University of Haifa
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